BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D11LP1|AL425861
(827 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1639 0.0
>3x_Contig1789
Length = 30977
Score = 1639 bits (827), Expect = 0.0
Identities = 827/827 (100%)
Strand = Plus / Minus
Query: 1 atcttagttctttgttgtgtttggatccgatttttttggtttgattgtggctttggtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28266 atcttagttctttgttgtgtttggatccgatttttttggtttgattgtggctttggtttt 28207
Query: 61 ggccttgacgttggtgagatttggatctggtcttcgaatggcctttcttgggagcctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28206 ggccttgacgttggtgagatttggatctggtcttcgaatggcctttcttgggagcctttg 28147
Query: 121 gcagcttactttgtggagtccttactgatgaggcagctttagtggaatcagcacctttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28146 gcagcttactttgtggagtccttactgatgaggcagctttagtggaatcagcacctttct 28087
Query: 181 ctactatgtcctcgtaatcatcatcatcttctggatcttttacattgcacactgcctggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28086 ctactatgtcctcgtaatcatcatcatcttctggatcttttacattgcacactgcctggt 28027
Query: 241 cattcggttgttgtgtgatttggttctctggggtctccaatcttgacgatgatgagcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28026 cattcggttgttgtgtgatttggttctctggggtctccaatcttgacgatgatgagcttg 27967
Query: 301 gaatagaaggtagtggcctagtagtgtatccatcctcctgtggtcccatggtatcatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27966 gaatagaaggtagtggcctagtagtgtatccatcctcctgtggtcccatggtatcatctt 27907
Query: 361 gctcagtagcagagaagaaactttcagatctcacactgctttgtcttgaatgtctctcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27906 gctcagtagcagagaagaaactttcagatctcacactgctttgtcttgaatgtctctcac 27847
Query: 421 tccggcttgcactggcactgtgacctttccccatctcctttgcaagttgattctgaatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27846 tccggcttgcactggcactgtgacctttccccatctcctttgcaagttgattctgaatat 27787
Query: 481 catctaaactttccttgataaatatatgtgacttgggccttcttgcgcttcttggtggta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27786 catctaaactttccttgataaatatatgtgacttgggccttcttgcgcttcttggtggta 27727
Query: 541 ctgttggatgtaagtctgatatgatttcaagttctggttcagcaccagcggtcttcttac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27726 ctgttggatgtaagtctgatatgatttcaagttctggttcagcaccagcggtcttcttac 27667
Query: 601 tgttaacttgagtttctagtggtggtaatatactcgaagcaattgatttgatttcggata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27666 tgttaacttgagtttctagtggtggtaatatactcgaagcaattgatttgatttcggata 27607
Query: 661 cctgagatatatcttgctggcttggagcctgtgatatgtttagtggtgtagtgtccgaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27606 cctgagatatatcttgctggcttggagcctgtgatatgtttagtggtgtagtgtccgaaa 27547
Query: 721 ttgcttctgtgacattgaccttggggatgttattataatcagaaactggagtttgttgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27546 ttgcttctgtgacattgaccttggggatgttattataatcagaaactggagtttgttgtt 27487
Query: 781 gctcatcgtacgattcctctttaattgtcgtcgtttcaagttgagat 827
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27486 gctcatcgtacgattcctctttaattgtcgtcgtttcaagttgagat 27440
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6721
Number of Sequences: 1807
Number of extensions: 6721
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 827
length of database: 10,358,551
effective HSP length: 16
effective length of query: 811
effective length of database: 10,329,639
effective search space: 8377337229
effective search space used: 8377337229
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)